LDhelmet

LDhelmet performs statistical inference for fine-scale variable recombination rate estimation.

The source code and the recombination maps for two populations of Drosophila melanogaster are available for download.

Reference:
Andrew H. Chan, Paul A. Jenkins, Yun S. Song (2012). Genome-Wide Fine-Scale Recombination Rate Variation in Drosophila melanogaster. PLoS Genet 8(12): e1003090. doi:10.1371/journal.pgen.1003090

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