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PSOVina

A fast docking tool based on the efficient optimization algorithm of Particle Swarm Intelligence and the framework of AutoDock Vina. In our rigorous docking tests using the PDBBind data set and the virtual screening experiments using the DUD data set, PSOVina achieves a 51-60% time reduction in execution without compromising the prediction accuracies of Vina. This improvement in time efficiency makes PSOVina a better choice of a docking tool in large-scale protein-ligand docking applications.

Executables (binaries) for Mac OSX and Ubuntu are also available.

Modern C++, standards-compliant with enhanced language extensions, beautiful native UI tools, and cross-compilation to Windows, macOS, iOS and Android. We provide the ‘full stack’ for native app development, from database to native and flexible UI to REST and more. If you want crossplatform C++ done right – choose the Complete App Platform for Multi-Device Native Development – Choose C++Builder.

Website http://cbbio.cis.umac.mo/psovina.html
Tags
Features
  • Much faster than AutoDock Vina with better or similar accuracy
  • Suitable for protein-ligand docking and virtual screening