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sdmixer

The open source software sdmixer reconstructs a TIFF image from a single molecule localization data set. The spectral demixing option allows multi color super resolution microscopy. sdmixer supports multipage TIFF images and is able to process large 3D data sets. Further features are 2D/3D convolution, histogram based contrast enhancement and nearest neighbor analysis.

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Website https://github.com/gtadeus/sdmixer2
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Platform
Features
  • Efficient generation of 2D/3D TIFF Images from super resolution microscopy data
  • Allows multi-color spectral demixing direct STORM (SD-dSTORM)
  • readily works with rapidSTORM
  • 2D/3D convolution
  • nearest neighbor analysis