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Snp Viewer

Posted on by Robin Ding Leave a comment Bio-Informatics, Visualization

A program for visualising Affymetrix SNP array data for identification regions of homozygosity. Written to aid autozygosity mapping and aid the discovery of potential disease loci.

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Website http://snpviewer.sourceforge.net/
Tags
License GNU General Public License version 3.0 (GPLv3)
Platform Linux Mac Windows
Features
  • Analyses birdseed files generated by Affymetrix Genotyping Console
  • Simple, intuitive interface
  • Easily identify shared regions of homozygosity
  • Automatically identifies concordant or non-concordant shared regions
  • Browse by chromosome
  • Zoom views
  • Select and save regions
  • Output regions to formatted .xlsx files
  • Save and share projects