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Tissue Simulation Toolkit

Tissue Simulation Toolkit is a two-dimensional library for the Cellular Potts Model (Graner and Glazier 1992; Phys. Rev. Lett. 69, 2013), which is increasingly used by computational biologists to study tissue patterning and developmental mechanisms.

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Website https://tst.sourceforge.io
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  • Solved some minor problems with reading numbers on European systems (setLocale(LC_NUMERIC, "C"))
  • Minor bugfix: length constraint failed on very large lattices (± 5000 x 5000)